You can do either the Transfer of Fund to record a deposit. Transfer will be easier. If you decide to use the Deposit option then when in the Record Income or Sales, click on the Other Sales and Expense Reductions button. Enter the dollar amount coming from the Hedge account to farm checking. Change account option to other accounts and select the Hedging checking account name. There will not be an option for allocation, since this is just a transfer from hedge to checking. Click OK. Then record the deposit as usual.